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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942533.1_cds_XP_016485976.1_76855
CDS Infomation

[gene=LOC107806347] [db_xref=GeneID:107806347] [protein=N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1-like isoform X3] [protein_id=XP_016485976.1] [location=join(11591..11602,11693..11833,11915..12018,12109..12327,12537..13031,14423..14844,15959..16052,16872..17007)] [gbkey=CDS]
Sequence

ATGTTCACGTATGTAGTGTTTTATGGAATTCCCGTGTTTGGTGGCCACCATTACTCATTG
GGTTTCAAGAGTTCATCTGATGGGGTGACAAACCATTGCAAGAAGCCTGAATGGGTTAAG
GATCTTAACAGGAAGCAACCATATCTTGACTTGGATGCTGTAATTCTATCTATCAACACT
GCTAATGCGGCTAAAGTATTTACCGAAGCATATTGTTCTGCCAAAAGATCCAGGGTTTCG
TTCCATTTCTTTTGCATGTTTTCTATTCTGACATGGCAACTGCTTGCTGTATTGCTTGCA
TCATTCTCAACTATCTTCTACGTCGTCCTTCAGTCGTTCCATGTCTTGAGCCATGTGTCC
CAATCATATATCTACGTCGCATTGGAGAAGGTATTCTGCAATACATGTAAAAATCTAGAA
ATACGGTGCTGCCAACTCCTGTATTGGCCAGTTTTTCTCAAAGATTATGGTCTCAGGTCT
CAATCTTGTGTGGAGTATGCTGAGAAAGCAGCATTTCACAAGCATTCCATGTGGACAAGC
CTTGTAGTTGATCTACTTCTGGGGAACTTTCTTGGCATCATATTGTGGTGTCGAGCAAGA
GAAGCTTGTGCATGGATTTCAGTTTTTTCTGAAAATGCCACTAATTATCTTCTGCGTACT
GGTTGTGTGTGGCTTATGGGAAACCCAGCGGGATTCAAGCTGAACACTGAGCTAGCTGGA
GTTCTTGGGACAATATCCCTGATTGCTATTCAAATTTGGTCTACCATTTGGTGGTTATTG
GGTTTATTCTTGATTCATCTCATAAAAGTAGTTGCTGTATTTGGTTCGTTGTTTGGGCTG
ACTGCAGCAGCTGCTCTGATCATTGACACAATTTCACTAGCAACAACACATGTTTCTACT
CTTCAGTGGTTGCTTACACTGCTCTATTCATGGCAAATACAGGCTGTAGATGCTTTATGG
CGTCTTTTCAGGGGTAGGAAGTGGAATCCTCTTCGTCAGAGACTAGACAGCTATGCGTAC
AGTGTGGAGCAGCATGTAGTTGGGTCTCTCCTATTTACTCCACTTCTACTTCTGCTGCCG
ACGACTTCATTGTTCTATATTTTCTTCACCATTATGAAGACAACCATTAGCTTTGTCTGC
ATAGCCATTCAGTTTGGCATATCTATAATTCATGCCACACCGTACATTAAGATTTTCATT
TGGTTCGTGAGGAGAAAACGTTTTCCTTGTGGATTATGGTTTGATATTGTTTTGTGTCAG
AGAAATGCCACTAATTCTTCAGAGGTTAAATCTGCTGAAAAGACTGCATCAGGCTCTGAG
AATTCTCTCCGCGCAAGCTGCTGTAGATCGACAGTTCTGGTTTCATTTCTTCACAGCAAT
TTTTTGAACTTAAGACAAGTAGTTTGGCCCCACTATCGAAATGTTTTTTCAGATGTATCT
AGATCTTCTATTGCATTGTCAGCTTATGGAATTCTTACAGGAAAAAGAACTCCATCAGCT
CCAAAGATTGGCCTTCCCCCGACGTTGCCATGGCTGTCTATTCCATATAAAGAATACTGG
CGCCTTTGCCATGAAGCTGTCCTCGCTTGCAAGCAAGATTGCATCTGCCAATTGCACCGA
TAG

Peptide Sequence

PEP ID

XP_016485976.1
PEP Infomation

PREDICTED: N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1-like isoform X3 [Nicotiana tabacum]
Sequence

MFTYVVFYGIPVFGGHHYSLGFKSSSDGVTNHCKKPEWVKDLNRKQPYLDLDAVILSINT
ANAAKVFTEAYCSAKRSRVSFHFFCMFSILTWQLLAVLLASFSTIFYVVLQSFHVLSHVS
QSYIYVALEKVFCNTCKNLEIRCCQLLYWPVFLKDYGLRSQSCVEYAEKAAFHKHSMWTS
LVVDLLLGNFLGIILWCRAREACAWISVFSENATNYLLRTGCVWLMGNPAGFKLNTELAG
VLGTISLIAIQIWSTIWWLLGLFLIHLIKVVAVFGSLFGLTAAAALIIDTISLATTHVST
LQWLLTLLYSWQIQAVDALWRLFRGRKWNPLRQRLDSYAYSVEQHVVGSLLFTPLLLLLP
TTSLFYIFFTIMKTTISFVCIAIQFGISIIHATPYIKIFIWFVRRKRFPCGLWFDIVLCQ
RNATNSSEVKSAEKTASGSENSLRASCCRSTVLVSFLHSNFLNLRQVVWPHYRNVFSDVS
RSSIALSAYGILTGKRTPSAPKIGLPPTLPWLSIPYKEYWRLCHEAVLACKQDCICQLHR

Transcript Sequence

Gene sequence data has not been registered.